Index

Here we have all the code related to the analysis presented in the "Functional impact of multi-omic interactions in breast cancer subtypes" by Soledad Ochoa and Enrique Hernández-Lemus

Order to replicate the analysis

• Data pre-procesing
  prepro.Rmd
• Fit the SGCCA
  sgcca.Rmd
• Analysis of SGCCA results
  sgccAnalys.Rmd
• Plot a MI network
  MIplot.Rmd
• Needed packages
  

Check https://github.com/CSB-IG/SGCCA

Pages as in https://github.com/lmullen/rmd-notebook